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Campylobacterota

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Campylobacterota
Campylobacter
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Campylobacterota
Waite et al. 2021[1]
Classes
Synonyms
  • "Campylobacterota" Waite et al. 2018
  • Epsilobacteria Cavalier-Smith 2002
  • "Epsilonbacteraeota" (sic) Waite et al. 2017[2]
  • "Epsilonbacterota"

Campylobacterota are a phylum of Gram-negative bacteria.[3] Until the 2021 revision of bacterial taxonomy by the ICSP,[4] the entire phylum was classified within the Proteobacteria (synonym Pseudomonadota) as the Epsilonproteobacteria and the Desulfurellales.[5] The separation of this phylum from "Proteobacteria" was originally proposed in 2017, using GTDB-based methods.[2]

Phylogeny

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The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[6] and National Center for Biotechnology Information (NCBI)[7]

16S rRNA based LTP_10_2024[8][9][10] 120 marker proteins based GTDB 09-RS220[11][12][13]
Desulfurellia
Campylobacteria
Nautiliales
Campylobacterales

Nitratiruptoraceae

Hydrogenimonadaceae

Thioreductoraceae

Helicobacteraceae

Sulfurovaceae

Sulfurimonadaceae

Sulfurospirillaceae

Arcobacteraceae

Campylobacteraceae

Desulfurellia
Desulfurellales

Desulfurellaceae Kuever, Rainey & Widdel 2006

Hippeaceae Waite et al. 2020

{Campylobacterota_A}
Campylobacteria
Nautiliales

Nautiliaceae Miroshnichenko et al. 2004

Campylobacterales

Helicobacteraceae Garrity et al. 2006

Arcobacteraceae Waite et al. 2020

Sulfurospirillaceae Waite et al. 2020

Campylobacteraceae Vandamme & De Ley 1991

Thiovulaceae Waite et al. 2020

Sulfurimonadaceae Waite et al. 2020

Nitratiruptoraceae Waite et al. 2020

Hydrogenimonadaceae Waite et al. 2020

Sulfurovaceae Waite et al. 2020

{Campylobacterota}

See also

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References

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  1. ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.
  2. ^ a b Waite, David W.; Vanwonterghem, Inka; Rinke, Christian; Parks, Donovan H.; Zhang, Ying; Takai, Ken; Sievert, Stefan M.; Simon, Jörg; Campbell, Barbara J.; Hanson, Thomas E.; Woyke, Tanja; Klotz, Martin G.; Hugenholtz, Philip (2017). "Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)". Frontiers in Microbiology. 8: 682. doi:10.3389/fmicb.2017.00682. ISSN 1664-302X. PMC 5401914. PMID 28484436.
  3. ^ "www.ncbi.nlm.nih.gov". Retrieved 2009-03-19.
  4. ^ Robitzski, Dan. "Newly Renamed Prokaryote Phyla Cause Uproar". The Scientist. LabX Media Group. Retrieved 17 February 2024.
  5. ^ Berman, Jules (2019). Taxonomic Guide to Infectious Diseases (2 ed.). Elsevier. pp. 39–119. Retrieved 17 February 2024.
  6. ^ A.C. Parte; et al. "Campylobacterota". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
  7. ^ Sayers; et al. "Campylobacterota". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
  8. ^ "The LTP". Retrieved 10 December 2024.
  9. ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
  10. ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  11. ^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
  12. ^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
  13. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.
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